Cluster: HRGMv2_4058_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4058
- CGC Family ID: CGCFAM_03048
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4058_5 | HRGMv2_4058_5_4 | 3361 | 4458 | + | CE1 |
| NULL(UNKNOWN) | HRGMv2_4058_5 | HRGMv2_4058_5_5 | 4619 | 5311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4058_5 | HRGMv2_4058_5_6 | 5391 | 8888 | + | GH3 |
| pfam | HRGMv2_4058_5 | HRGMv2_4058_5_7 | 9369 | 10022 | - | SIMPL |
| TC | HRGMv2_4058_5 | HRGMv2_4058_5_8 | 10948 | 11847 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_4058_5 | HRGMv2_4058_5_9 | 11954 | 13084 | + | GT4 |
Gene ID: HRGMv2_4058_5_4
Type: CAZyme
Location: 3361 - 4458 (+)
Type: CAZyme
Location: 3361 - 4458 (+)
Gene ID: HRGMv2_4058_5_5
Type:
Location: 4619 - 5311 (+)
Type:
Location: 4619 - 5311 (+)
Gene ID: HRGMv2_4058_5_6
Type: CAZyme
Location: 5391 - 8888 (+)
Type: CAZyme
Location: 5391 - 8888 (+)
Gene ID: HRGMv2_4058_5_7
Type: pfam
Location: 9369 - 10022 (-)
Type: pfam
Location: 9369 - 10022 (-)
Gene ID: HRGMv2_4058_5_8
Type: TC
Location: 10948 - 11847 (+)
Type: TC
Location: 10948 - 11847 (+)
Gene ID: HRGMv2_4058_5_9
Type: CAZyme
Location: 11954 - 13084 (+)
Type: CAZyme
Location: 11954 - 13084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
RGIG4074
Species
RGIG4074 sp944376455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.