Cluster: HRGMv2_4058_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4058
- CGC Family ID: CGCFAM_08441
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4058_4 | HRGMv2_4058_4_67 | 81983 | 84658 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_4058_4 | HRGMv2_4058_4_68 | 84807 | 85550 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4058_4 | HRGMv2_4058_4_69 | 85683 | 86717 | + | GT2 |
| pfam | HRGMv2_4058_4 | HRGMv2_4058_4_70 | 86736 | 87677 | + | ROK |
| pfam | HRGMv2_4058_4 | HRGMv2_4058_4_71 | 88433 | 88951 | - | Ferritin |
| TC | HRGMv2_4058_4 | HRGMv2_4058_4_72 | 89673 | 90380 | + | 1.C.113.1.3 |
Gene ID: HRGMv2_4058_4_67
Type: CAZyme
Location: 81983 - 84658 (+)
Type: CAZyme
Location: 81983 - 84658 (+)
Gene ID: HRGMv2_4058_4_68
Type:
Location: 84807 - 85550 (+)
Type:
Location: 84807 - 85550 (+)
Gene ID: HRGMv2_4058_4_69
Type: CAZyme
Location: 85683 - 86717 (+)
Type: CAZyme
Location: 85683 - 86717 (+)
Gene ID: HRGMv2_4058_4_70
Type: pfam
Location: 86736 - 87677 (+)
Type: pfam
Location: 86736 - 87677 (+)
Gene ID: HRGMv2_4058_4_71
Type: pfam
Location: 88433 - 88951 (-)
Type: pfam
Location: 88433 - 88951 (-)
Gene ID: HRGMv2_4058_4_72
Type: TC
Location: 89673 - 90380 (+)
Type: TC
Location: 89673 - 90380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
RGIG4074
Species
RGIG4074 sp944376455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.