Cluster: HRGMv2_4058_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4058
- CGC Family ID: CGCFAM_05356
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4058_44 | HRGMv2_4058_44_2 | 1578 | 3035 | - | 3.A.9.1.1 |
| pfam | HRGMv2_4058_44 | HRGMv2_4058_44_3 | 3032 | 3319 | - | GatC |
| pfam | HRGMv2_4058_44 | HRGMv2_4058_44_4 | 3324 | 5081 | - | tRNA-synt_2 | tRNA_anti-codon | GAD |
| TC | HRGMv2_4058_44 | HRGMv2_4058_44_5 | 5602 | 6813 | + | 2.A.45.2.6 |
| CAZyme | HRGMv2_4058_44 | HRGMv2_4058_44_6 | 7035 | 10352 | - | GH3 |
Gene ID: HRGMv2_4058_44_2
Type: TC
Location: 1578 - 3035 (-)
Type: TC
Location: 1578 - 3035 (-)
Gene ID: HRGMv2_4058_44_3
Type: pfam
Location: 3032 - 3319 (-)
Type: pfam
Location: 3032 - 3319 (-)
Gene ID: HRGMv2_4058_44_4
Type: pfam
Location: 3324 - 5081 (-)
Type: pfam
Location: 3324 - 5081 (-)
Gene ID: HRGMv2_4058_44_5
Type: TC
Location: 5602 - 6813 (+)
Type: TC
Location: 5602 - 6813 (+)
Gene ID: HRGMv2_4058_44_6
Type: CAZyme
Location: 7035 - 10352 (-)
Type: CAZyme
Location: 7035 - 10352 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
RGIG4074
Species
RGIG4074 sp944376455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.