Cluster: HRGMv2_4058_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4058
- CGC Family ID: CGCFAM_04528
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4058_12 | HRGMv2_4058_12_29 | 32914 | 36012 | - | GH3 |
| CAZyme | HRGMv2_4058_12 | HRGMv2_4058_12_30 | 36407 | 38215 | + | GH5_54 |
| STP | HRGMv2_4058_12 | HRGMv2_4058_12_31 | 38290 | 38805 | + | TetR_N |
| CAZyme | HRGMv2_4058_12 | HRGMv2_4058_12_32 | 38973 | 42017 | + | GH3 |
| STP | HRGMv2_4058_12 | HRGMv2_4058_12_33 | 42175 | 43032 | + | SBP_bac_3 | SBP_bac_3 |
| TC | HRGMv2_4058_12 | HRGMv2_4058_12_34 | 43042 | 43728 | + | 3.A.1.3.15 |
| TC | HRGMv2_4058_12 | HRGMv2_4058_12_35 | 43734 | 44651 | + | 3.A.1.3.23 |
Gene ID: HRGMv2_4058_12_29
Type: CAZyme
Location: 32914 - 36012 (-)
Type: CAZyme
Location: 32914 - 36012 (-)
Gene ID: HRGMv2_4058_12_30
Type: CAZyme
Location: 36407 - 38215 (+)
Type: CAZyme
Location: 36407 - 38215 (+)
Gene ID: HRGMv2_4058_12_31
Type: STP
Location: 38290 - 38805 (+)
Type: STP
Location: 38290 - 38805 (+)
Gene ID: HRGMv2_4058_12_32
Type: CAZyme
Location: 38973 - 42017 (+)
Type: CAZyme
Location: 38973 - 42017 (+)
Gene ID: HRGMv2_4058_12_33
Type: STP
Location: 42175 - 43032 (+)
Type: STP
Location: 42175 - 43032 (+)
Gene ID: HRGMv2_4058_12_34
Type: TC
Location: 43042 - 43728 (+)
Type: TC
Location: 43042 - 43728 (+)
Gene ID: HRGMv2_4058_12_35
Type: TC
Location: 43734 - 44651 (+)
Type: TC
Location: 43734 - 44651 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
RGIG4074
Species
RGIG4074 sp944376455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.