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Cluster: HRGMv2_4058_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4058_11 HRGMv2_4058_11_10 11606 12265 - 2.A.38.4.4
TC HRGMv2_4058_11 HRGMv2_4058_11_11 12308 13618 - 2.A.38.4.1
NULL(UNKNOWN) HRGMv2_4058_11 HRGMv2_4058_11_12 13928 14242 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4058_11 HRGMv2_4058_11_13 14239 15606 + Lipase_GDSL_2
TC HRGMv2_4058_11 HRGMv2_4058_11_14 15738 17486 - 2.A.66.1.40
pfam HRGMv2_4058_11 HRGMv2_4058_11_15 17689 18132 - DUF386
TC HRGMv2_4058_11 HRGMv2_4058_11_16 18220 19782 - 9.B.67.3.6
CAZyme HRGMv2_4058_11 HRGMv2_4058_11_17 19904 21043 - GT4
CAZyme HRGMv2_4058_11 HRGMv2_4058_11_18 21065 22291 - GT4
pfam HRGMv2_4058_11 HRGMv2_4058_11_19 22288 22911 - Hexapep | Hexapep_2 | Hexapep_2
CAZyme HRGMv2_4058_11 HRGMv2_4058_11_20 22916 24256 - GT4
Gene ID: HRGMv2_4058_11_10
Type: TC
Location: 11606 - 12265 (-)
Gene ID: HRGMv2_4058_11_11
Type: TC
Location: 12308 - 13618 (-)
Gene ID: HRGMv2_4058_11_12
Type:
Location: 13928 - 14242 (+)
Gene ID: HRGMv2_4058_11_13
Type: pfam
Location: 14239 - 15606 (+)
Gene ID: HRGMv2_4058_11_14
Type: TC
Location: 15738 - 17486 (-)
Gene ID: HRGMv2_4058_11_15
Type: pfam
Location: 17689 - 18132 (-)
Gene ID: HRGMv2_4058_11_16
Type: TC
Location: 18220 - 19782 (-)
Gene ID: HRGMv2_4058_11_17
Type: CAZyme
Location: 19904 - 21043 (-)
Gene ID: HRGMv2_4058_11_18
Type: CAZyme
Location: 21065 - 22291 (-)
Gene ID: HRGMv2_4058_11_19
Type: pfam
Location: 22288 - 22911 (-)
Gene ID: HRGMv2_4058_11_20
Type: CAZyme
Location: 22916 - 24256 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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