Cluster: HRGMv2_4057_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_10528
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4057_42 | HRGMv2_4057_42_1 | 2 | 988 | - | GH125 |
| NULL(UNKNOWN) | HRGMv2_4057_42 | HRGMv2_4057_42_2 | 1095 | 2345 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4057_42 | HRGMv2_4057_42_3 | 2463 | 3809 | - | 2.A.66.1.23 |
| TF | HRGMv2_4057_42 | HRGMv2_4057_42_4 | 4005 | 4892 | - | HTH_1 |
| pfam | HRGMv2_4057_42 | HRGMv2_4057_42_5 | 5004 | 5570 | + | Chromate_transp |
| TC | HRGMv2_4057_42 | HRGMv2_4057_42_6 | 5567 | 6115 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_4057_42_1
Type: CAZyme
Location: 2 - 988 (-)
Type: CAZyme
Location: 2 - 988 (-)
Gene ID: HRGMv2_4057_42_2
Type:
Location: 1095 - 2345 (-)
Type:
Location: 1095 - 2345 (-)
Gene ID: HRGMv2_4057_42_3
Type: TC
Location: 2463 - 3809 (-)
Type: TC
Location: 2463 - 3809 (-)
Gene ID: HRGMv2_4057_42_4
Type: TF
Location: 4005 - 4892 (-)
Type: TF
Location: 4005 - 4892 (-)
Gene ID: HRGMv2_4057_42_5
Type: pfam
Location: 5004 - 5570 (+)
Type: pfam
Location: 5004 - 5570 (+)
Gene ID: HRGMv2_4057_42_6
Type: TC
Location: 5567 - 6115 (+)
Type: TC
Location: 5567 - 6115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.