Cluster: HRGMv2_4057_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_00268
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4057_40 | HRGMv2_4057_40_6 | 6924 | 7466 | - | 4.F.1.1.8 |
| pfam | HRGMv2_4057_40 | HRGMv2_4057_40_7 | 7450 | 8793 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_4057_40 | HRGMv2_4057_40_8 | 8803 | 11295 | - | 3.A.12.1.1 |
| NULL(UNKNOWN) | HRGMv2_4057_40 | HRGMv2_4057_40_9 | 11669 | 12178 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4057_40 | HRGMv2_4057_40_10 | 12337 | 13302 | - | GH29 |
Gene ID: HRGMv2_4057_40_6
Type: TC
Location: 6924 - 7466 (-)
Type: TC
Location: 6924 - 7466 (-)
Gene ID: HRGMv2_4057_40_7
Type: pfam
Location: 7450 - 8793 (-)
Type: pfam
Location: 7450 - 8793 (-)
Gene ID: HRGMv2_4057_40_8
Type: TC
Location: 8803 - 11295 (-)
Type: TC
Location: 8803 - 11295 (-)
Gene ID: HRGMv2_4057_40_9
Type:
Location: 11669 - 12178 (-)
Type:
Location: 11669 - 12178 (-)
Gene ID: HRGMv2_4057_40_10
Type: CAZyme
Location: 12337 - 13302 (-)
Type: CAZyme
Location: 12337 - 13302 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.