Cluster: HRGMv2_4057_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_06268
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4057_35 | HRGMv2_4057_35_1 | 3 | 728 | - | 3.A.1.3.6 |
| TC | HRGMv2_4057_35 | HRGMv2_4057_35_2 | 742 | 1383 | - | 3.A.1.3.10 |
| TC | HRGMv2_4057_35 | HRGMv2_4057_35_3 | 1478 | 2395 | - | 3.A.1.3.10 |
| CAZyme | HRGMv2_4057_35 | HRGMv2_4057_35_4 | 2554 | 3357 | + | CE4 |
| pfam | HRGMv2_4057_35 | HRGMv2_4057_35_5 | 3471 | 4031 | + | DUF3267 |
| pfam | HRGMv2_4057_35 | HRGMv2_4057_35_6 | 4086 | 4709 | + | SSB |
| CAZyme | HRGMv2_4057_35 | HRGMv2_4057_35_7 | 4771 | 6699 | + | GH13_39 |
Gene ID: HRGMv2_4057_35_1
Type: TC
Location: 3 - 728 (-)
Type: TC
Location: 3 - 728 (-)
Gene ID: HRGMv2_4057_35_2
Type: TC
Location: 742 - 1383 (-)
Type: TC
Location: 742 - 1383 (-)
Gene ID: HRGMv2_4057_35_3
Type: TC
Location: 1478 - 2395 (-)
Type: TC
Location: 1478 - 2395 (-)
Gene ID: HRGMv2_4057_35_4
Type: CAZyme
Location: 2554 - 3357 (+)
Type: CAZyme
Location: 2554 - 3357 (+)
Gene ID: HRGMv2_4057_35_5
Type: pfam
Location: 3471 - 4031 (+)
Type: pfam
Location: 3471 - 4031 (+)
Gene ID: HRGMv2_4057_35_6
Type: pfam
Location: 4086 - 4709 (+)
Type: pfam
Location: 4086 - 4709 (+)
Gene ID: HRGMv2_4057_35_7
Type: CAZyme
Location: 4771 - 6699 (+)
Type: CAZyme
Location: 4771 - 6699 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.