Cluster: HRGMv2_4057_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_02741
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4057_28 | HRGMv2_4057_28_1 | 3 | 5075 | + | GH94 | GT84 |
| TC | HRGMv2_4057_28 | HRGMv2_4057_28_2 | 5134 | 6180 | - | 3.A.1.11.7 |
| TC | HRGMv2_4057_28 | HRGMv2_4057_28_3 | 6208 | 6987 | - | 3.A.1.11.7 |
| TC | HRGMv2_4057_28 | HRGMv2_4057_28_4 | 6988 | 7803 | - | 3.A.1.11.8 |
| TC | HRGMv2_4057_28 | HRGMv2_4057_28_5 | 7805 | 8869 | - | 3.A.1.11.8 |
Gene ID: HRGMv2_4057_28_1
Type: CAZyme
Location: 3 - 5075 (+)
Type: CAZyme
Location: 3 - 5075 (+)
Gene ID: HRGMv2_4057_28_2
Type: TC
Location: 5134 - 6180 (-)
Type: TC
Location: 5134 - 6180 (-)
Gene ID: HRGMv2_4057_28_3
Type: TC
Location: 6208 - 6987 (-)
Type: TC
Location: 6208 - 6987 (-)
Gene ID: HRGMv2_4057_28_4
Type: TC
Location: 6988 - 7803 (-)
Type: TC
Location: 6988 - 7803 (-)
Gene ID: HRGMv2_4057_28_5
Type: TC
Location: 7805 - 8869 (-)
Type: TC
Location: 7805 - 8869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.