Cluster: HRGMv2_4057_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_05033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4057_104 | HRGMv2_4057_104_2 | 818 | 1498 | - | 2.A.38.4.6 |
| TC | HRGMv2_4057_104 | HRGMv2_4057_104_3 | 1521 | 2903 | - | 2.A.38.4.1 |
| pfam | HRGMv2_4057_104 | HRGMv2_4057_104_4 | 2900 | 3664 | - | SpoU_methylase |
| CAZyme | HRGMv2_4057_104 | HRGMv2_4057_104_5 | 3789 | 5123 | + | GH32 |
| NULL(UNKNOWN) | HRGMv2_4057_104 | HRGMv2_4057_104_6 | 5256 | 6734 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4057_104 | HRGMv2_4057_104_7 | 6866 | 7813 | + | GH33 |
Gene ID: HRGMv2_4057_104_2
Type: TC
Location: 818 - 1498 (-)
Type: TC
Location: 818 - 1498 (-)
Gene ID: HRGMv2_4057_104_3
Type: TC
Location: 1521 - 2903 (-)
Type: TC
Location: 1521 - 2903 (-)
Gene ID: HRGMv2_4057_104_4
Type: pfam
Location: 2900 - 3664 (-)
Type: pfam
Location: 2900 - 3664 (-)
Gene ID: HRGMv2_4057_104_5
Type: CAZyme
Location: 3789 - 5123 (+)
Type: CAZyme
Location: 3789 - 5123 (+)
Gene ID: HRGMv2_4057_104_6
Type:
Location: 5256 - 6734 (+)
Type:
Location: 5256 - 6734 (+)
Gene ID: HRGMv2_4057_104_7
Type: CAZyme
Location: 6866 - 7813 (+)
Type: CAZyme
Location: 6866 - 7813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.