Cluster: HRGMv2_4057_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_00169
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4057_92 | HRGMv2_4057_92_1 | 299 | 823 | - | 4.F.1.1.8 |
| CAZyme | HRGMv2_4057_92 | HRGMv2_4057_92_2 | 845 | 2767 | - | GH151 |
| pfam | HRGMv2_4057_92 | HRGMv2_4057_92_3 | 2781 | 3215 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_4057_92 | HRGMv2_4057_92_4 | 3212 | 4207 | - | GT2 |
| TC | HRGMv2_4057_92 | HRGMv2_4057_92_5 | 4158 | 6917 | - | 9.B.144.1.5 |
Gene ID: HRGMv2_4057_92_1
Type: TC
Location: 299 - 823 (-)
Type: TC
Location: 299 - 823 (-)
Gene ID: HRGMv2_4057_92_2
Type: CAZyme
Location: 845 - 2767 (-)
Type: CAZyme
Location: 845 - 2767 (-)
Gene ID: HRGMv2_4057_92_3
Type: pfam
Location: 2781 - 3215 (-)
Type: pfam
Location: 2781 - 3215 (-)
Gene ID: HRGMv2_4057_92_4
Type: CAZyme
Location: 3212 - 4207 (-)
Type: CAZyme
Location: 3212 - 4207 (-)
Gene ID: HRGMv2_4057_92_5
Type: TC
Location: 4158 - 6917 (-)
Type: TC
Location: 4158 - 6917 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.