Cluster: HRGMv2_4057_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_04099
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4057_82 | HRGMv2_4057_82_5 | 3494 | 4360 | + | 3.A.1.3.10 |
| TC | HRGMv2_4057_82 | HRGMv2_4057_82_6 | 4472 | 5152 | + | 3.A.1.3.15 |
| TC | HRGMv2_4057_82 | HRGMv2_4057_82_7 | 5145 | 5867 | + | 3.A.1.3.15 |
| NULL(UNKNOWN) | HRGMv2_4057_82 | HRGMv2_4057_82_8 | 5879 | 6439 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4057_82 | HRGMv2_4057_82_9 | 6549 | 7373 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4057_82 | HRGMv2_4057_82_10 | 7513 | 8808 | + | GH109 |
| CAZyme | HRGMv2_4057_82 | HRGMv2_4057_82_11 | 8985 | 9866 | + | GH5_28 |
Gene ID: HRGMv2_4057_82_5
Type: TC
Location: 3494 - 4360 (+)
Type: TC
Location: 3494 - 4360 (+)
Gene ID: HRGMv2_4057_82_6
Type: TC
Location: 4472 - 5152 (+)
Type: TC
Location: 4472 - 5152 (+)
Gene ID: HRGMv2_4057_82_7
Type: TC
Location: 5145 - 5867 (+)
Type: TC
Location: 5145 - 5867 (+)
Gene ID: HRGMv2_4057_82_8
Type:
Location: 5879 - 6439 (+)
Type:
Location: 5879 - 6439 (+)
Gene ID: HRGMv2_4057_82_9
Type: TF
Location: 6549 - 7373 (-)
Type: TF
Location: 6549 - 7373 (-)
Gene ID: HRGMv2_4057_82_10
Type: CAZyme
Location: 7513 - 8808 (+)
Type: CAZyme
Location: 7513 - 8808 (+)
Gene ID: HRGMv2_4057_82_11
Type: CAZyme
Location: 8985 - 9866 (+)
Type: CAZyme
Location: 8985 - 9866 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.