Cluster: HRGMv2_4057_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4057
- CGC Family ID: CGCFAM_06266
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4057_55 | HRGMv2_4057_55_1 | 2 | 1045 | + | 3.A.1.147.4 |
| NULL(UNKNOWN) | HRGMv2_4057_55 | HRGMv2_4057_55_2 | 1216 | 3024 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4057_55 | HRGMv2_4057_55_3 | 3950 | 5272 | + | GH39 |
| CAZyme | HRGMv2_4057_55 | HRGMv2_4057_55_4 | 5346 | 6170 | - | CE1 |
| CAZyme | HRGMv2_4057_55 | HRGMv2_4057_55_5 | 6297 | 8009 | - | GH163 |
| CAZyme | HRGMv2_4057_55 | HRGMv2_4057_55_6 | 8143 | 9885 | - | GH163 |
Gene ID: HRGMv2_4057_55_1
Type: TC
Location: 2 - 1045 (+)
Type: TC
Location: 2 - 1045 (+)
Gene ID: HRGMv2_4057_55_2
Type:
Location: 1216 - 3024 (+)
Type:
Location: 1216 - 3024 (+)
Gene ID: HRGMv2_4057_55_3
Type: CAZyme
Location: 3950 - 5272 (+)
Type: CAZyme
Location: 3950 - 5272 (+)
Gene ID: HRGMv2_4057_55_4
Type: CAZyme
Location: 5346 - 6170 (-)
Type: CAZyme
Location: 5346 - 6170 (-)
Gene ID: HRGMv2_4057_55_5
Type: CAZyme
Location: 6297 - 8009 (-)
Type: CAZyme
Location: 6297 - 8009 (-)
Gene ID: HRGMv2_4057_55_6
Type: CAZyme
Location: 8143 - 9885 (-)
Type: CAZyme
Location: 8143 - 9885 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UMGS416
Genus
Parachristensenella
Species
Parachristensenella avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.