Cluster: HRGMv2_4056_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4056
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4056_30 | HRGMv2_4056_30_4 | 2931 | 5600 | + | GH31_7 |
| CAZyme | HRGMv2_4056_30 | HRGMv2_4056_30_5 | 5597 | 7411 | + | GH125 |
| CAZyme | HRGMv2_4056_30 | HRGMv2_4056_30_6 | 7415 | 9601 | + | GH65 |
| STP | HRGMv2_4056_30 | HRGMv2_4056_30_7 | 9715 | 11241 | + | SBP_bac_1 |
| STP | HRGMv2_4056_30 | HRGMv2_4056_30_8 | 11451 | 14363 | + | SBP_bac_1 |
| TC | HRGMv2_4056_30 | HRGMv2_4056_30_9 | 14360 | 15280 | + | 3.A.1.1.34 |
| TC | HRGMv2_4056_30 | HRGMv2_4056_30_10 | 15277 | 16197 | + | 3.A.1.1.39 |
Gene ID: HRGMv2_4056_30_4
Type: CAZyme
Location: 2931 - 5600 (+)
Type: CAZyme
Location: 2931 - 5600 (+)
Gene ID: HRGMv2_4056_30_5
Type: CAZyme
Location: 5597 - 7411 (+)
Type: CAZyme
Location: 5597 - 7411 (+)
Gene ID: HRGMv2_4056_30_6
Type: CAZyme
Location: 7415 - 9601 (+)
Type: CAZyme
Location: 7415 - 9601 (+)
Gene ID: HRGMv2_4056_30_7
Type: STP
Location: 9715 - 11241 (+)
Type: STP
Location: 9715 - 11241 (+)
Gene ID: HRGMv2_4056_30_8
Type: STP
Location: 11451 - 14363 (+)
Type: STP
Location: 11451 - 14363 (+)
Gene ID: HRGMv2_4056_30_9
Type: TC
Location: 14360 - 15280 (+)
Type: TC
Location: 14360 - 15280 (+)
Gene ID: HRGMv2_4056_30_10
Type: TC
Location: 15277 - 16197 (+)
Type: TC
Location: 15277 - 16197 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900549955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.