Cluster: HRGMv2_4056_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4056
- CGC Family ID: CGCFAM_00033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4056_29 | HRGMv2_4056_29_4 | 4646 | 5518 | + | GT2 |
| CAZyme | HRGMv2_4056_29 | HRGMv2_4056_29_5 | 5515 | 6594 | + | GT4 |
| CAZyme | HRGMv2_4056_29 | HRGMv2_4056_29_6 | 6591 | 7673 | + | GT4 |
| pfam | HRGMv2_4056_29 | HRGMv2_4056_29_7 | 7648 | 9759 | + | Wzy_C | ATPgrasp_TupA |
| TC | HRGMv2_4056_29 | HRGMv2_4056_29_8 | 9763 | 11217 | + | 2.A.66.2.23 |
Gene ID: HRGMv2_4056_29_4
Type: CAZyme
Location: 4646 - 5518 (+)
Type: CAZyme
Location: 4646 - 5518 (+)
Gene ID: HRGMv2_4056_29_5
Type: CAZyme
Location: 5515 - 6594 (+)
Type: CAZyme
Location: 5515 - 6594 (+)
Gene ID: HRGMv2_4056_29_6
Type: CAZyme
Location: 6591 - 7673 (+)
Type: CAZyme
Location: 6591 - 7673 (+)
Gene ID: HRGMv2_4056_29_7
Type: pfam
Location: 7648 - 9759 (+)
Type: pfam
Location: 7648 - 9759 (+)
Gene ID: HRGMv2_4056_29_8
Type: TC
Location: 9763 - 11217 (+)
Type: TC
Location: 9763 - 11217 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900549955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.