Cluster: HRGMv2_4056_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4056
- CGC Family ID: CGCFAM_06024
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4056_13 | HRGMv2_4056_13_10 | 10554 | 11063 | - | 9.B.156.3.1 |
| TC | HRGMv2_4056_13 | HRGMv2_4056_13_11 | 11060 | 11668 | - | 9.B.156.3.1 |
| pfam | HRGMv2_4056_13 | HRGMv2_4056_13_12 | 12036 | 14777 | + | Transpeptidase | Transpeptidase | PBP_dimer | MecA_N |
| CAZyme | HRGMv2_4056_13 | HRGMv2_4056_13_13 | 14902 | 16026 | + | GT28 |
Gene ID: HRGMv2_4056_13_10
Type: TC
Location: 10554 - 11063 (-)
Type: TC
Location: 10554 - 11063 (-)
Gene ID: HRGMv2_4056_13_11
Type: TC
Location: 11060 - 11668 (-)
Type: TC
Location: 11060 - 11668 (-)
Gene ID: HRGMv2_4056_13_12
Type: pfam
Location: 12036 - 14777 (+)
Type: pfam
Location: 12036 - 14777 (+)
Gene ID: HRGMv2_4056_13_13
Type: CAZyme
Location: 14902 - 16026 (+)
Type: CAZyme
Location: 14902 - 16026 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900549955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.