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Cluster: HRGMv2_4056_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4056_8 HRGMv2_4056_8_2 2147 2902 + GT2
CAZyme HRGMv2_4056_8 HRGMv2_4056_8_3 2899 3933 + GT2
TC HRGMv2_4056_8 HRGMv2_4056_8_4 3937 4746 + 3.A.1.103.4
TC HRGMv2_4056_8 HRGMv2_4056_8_5 4767 5546 + 3.A.1.103.1
CAZyme HRGMv2_4056_8 HRGMv2_4056_8_6 5579 6589 + GT2
pfam HRGMv2_4056_8 HRGMv2_4056_8_7 6650 7759 + Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_4056_8 HRGMv2_4056_8_8 7759 8835 + GT2
CAZyme HRGMv2_4056_8 HRGMv2_4056_8_9 8845 10944 + GT2
Gene ID: HRGMv2_4056_8_2
Type: CAZyme
Location: 2147 - 2902 (+)
Gene ID: HRGMv2_4056_8_3
Type: CAZyme
Location: 2899 - 3933 (+)
Gene ID: HRGMv2_4056_8_4
Type: TC
Location: 3937 - 4746 (+)
Gene ID: HRGMv2_4056_8_5
Type: TC
Location: 4767 - 5546 (+)
Gene ID: HRGMv2_4056_8_6
Type: CAZyme
Location: 5579 - 6589 (+)
Gene ID: HRGMv2_4056_8_7
Type: pfam
Location: 6650 - 7759 (+)
Gene ID: HRGMv2_4056_8_8
Type: CAZyme
Location: 7759 - 8835 (+)
Gene ID: HRGMv2_4056_8_9
Type: CAZyme
Location: 8845 - 10944 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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