Cluster: HRGMv2_4056_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4056
- CGC Family ID: CGCFAM_00845
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4056_2 | HRGMv2_4056_2_44 | 53738 | 54487 | - | 3.A.1.103.5 |
| TC | HRGMv2_4056_2 | HRGMv2_4056_2_45 | 54498 | 55298 | - | 3.A.1.103.4 |
| pfam | HRGMv2_4056_2 | HRGMv2_4056_2_46 | 55279 | 56496 | - | Glyphos_transf |
| CAZyme | HRGMv2_4056_2 | HRGMv2_4056_2_47 | 56493 | 57242 | - | GT2 |
| TC | HRGMv2_4056_2 | HRGMv2_4056_2_48 | 57239 | 58582 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_4056_2_44
Type: TC
Location: 53738 - 54487 (-)
Type: TC
Location: 53738 - 54487 (-)
Gene ID: HRGMv2_4056_2_45
Type: TC
Location: 54498 - 55298 (-)
Type: TC
Location: 54498 - 55298 (-)
Gene ID: HRGMv2_4056_2_46
Type: pfam
Location: 55279 - 56496 (-)
Type: pfam
Location: 55279 - 56496 (-)
Gene ID: HRGMv2_4056_2_47
Type: CAZyme
Location: 56493 - 57242 (-)
Type: CAZyme
Location: 56493 - 57242 (-)
Gene ID: HRGMv2_4056_2_48
Type: TC
Location: 57239 - 58582 (-)
Type: TC
Location: 57239 - 58582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900549955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.