Cluster: HRGMv2_4056_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4056
- CGC Family ID: CGCFAM_09676
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4056_53 | HRGMv2_4056_53_1 | 32 | 1231 | - | GH13 |
| pfam | HRGMv2_4056_53 | HRGMv2_4056_53_2 | 1612 | 2145 | + | DUF308 | DUF308 | DUF308 |
| TC | HRGMv2_4056_53 | HRGMv2_4056_53_3 | 2317 | 3168 | - | 2.A.115.1.5 |
Gene ID: HRGMv2_4056_53_1
Type: CAZyme
Location: 32 - 1231 (-)
Type: CAZyme
Location: 32 - 1231 (-)
Gene ID: HRGMv2_4056_53_2
Type: pfam
Location: 1612 - 2145 (+)
Type: pfam
Location: 1612 - 2145 (+)
Gene ID: HRGMv2_4056_53_3
Type: TC
Location: 2317 - 3168 (-)
Type: TC
Location: 2317 - 3168 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900549955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.