Cluster: HRGMv2_4056_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4056
- CGC Family ID: CGCFAM_02119
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4056_45 | HRGMv2_4056_45_3 | 2316 | 3455 | + | CE4 |
| TF | HRGMv2_4056_45 | HRGMv2_4056_45_4 | 3655 | 4629 | + | HTH_11 |
| TC | HRGMv2_4056_45 | HRGMv2_4056_45_5 | 4695 | 5243 | + | 3.A.1.25.5 |
Gene ID: HRGMv2_4056_45_3
Type: CAZyme
Location: 2316 - 3455 (+)
Type: CAZyme
Location: 2316 - 3455 (+)
Gene ID: HRGMv2_4056_45_4
Type: TF
Location: 3655 - 4629 (+)
Type: TF
Location: 3655 - 4629 (+)
Gene ID: HRGMv2_4056_45_5
Type: TC
Location: 4695 - 5243 (+)
Type: TC
Location: 4695 - 5243 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900549955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.