Cluster: HRGMv2_4055_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4055
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4055_10 | HRGMv2_4055_10_21 | 21477 | 22487 | + | 3.A.1.1.28 |
| TC | HRGMv2_4055_10 | HRGMv2_4055_10_22 | 22487 | 23500 | + | 3.A.1.1.36 |
| NULL(UNKNOWN) | HRGMv2_4055_10 | HRGMv2_4055_10_23 | 23636 | 25516 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4055_10 | HRGMv2_4055_10_24 | 25614 | 27206 | + | GH43_4 |
| TC | HRGMv2_4055_10 | HRGMv2_4055_10_25 | 27524 | 28576 | + | 9.B.143.2.3 |
Gene ID: HRGMv2_4055_10_21
Type: TC
Location: 21477 - 22487 (+)
Type: TC
Location: 21477 - 22487 (+)
Gene ID: HRGMv2_4055_10_22
Type: TC
Location: 22487 - 23500 (+)
Type: TC
Location: 22487 - 23500 (+)
Gene ID: HRGMv2_4055_10_23
Type:
Location: 23636 - 25516 (+)
Type:
Location: 23636 - 25516 (+)
Gene ID: HRGMv2_4055_10_24
Type: CAZyme
Location: 25614 - 27206 (+)
Type: CAZyme
Location: 25614 - 27206 (+)
Gene ID: HRGMv2_4055_10_25
Type: TC
Location: 27524 - 28576 (+)
Type: TC
Location: 27524 - 28576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.