Cluster: HRGMv2_4055_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4055
- CGC Family ID: CGCFAM_00036
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4055_6 | HRGMv2_4055_6_20 | 20451 | 21806 | - | 2.A.66.1.32 |
| NULL(UNKNOWN) | HRGMv2_4055_6 | HRGMv2_4055_6_21 | 21963 | 22397 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4055_6 | HRGMv2_4055_6_22 | 22648 | 23745 | - | GLF | NAD_binding_8 |
| TC | HRGMv2_4055_6 | HRGMv2_4055_6_23 | 23757 | 24515 | - | 3.A.1.103.1 |
| TC | HRGMv2_4055_6 | HRGMv2_4055_6_24 | 24526 | 25329 | - | 3.A.1.103.4 |
| CAZyme | HRGMv2_4055_6 | HRGMv2_4055_6_25 | 25368 | 26483 | - | GT4 |
| TC | HRGMv2_4055_6 | HRGMv2_4055_6_26 | 26483 | 27172 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_4055_6_20
Type: TC
Location: 20451 - 21806 (-)
Type: TC
Location: 20451 - 21806 (-)
Gene ID: HRGMv2_4055_6_21
Type:
Location: 21963 - 22397 (-)
Type:
Location: 21963 - 22397 (-)
Gene ID: HRGMv2_4055_6_22
Type: pfam
Location: 22648 - 23745 (-)
Type: pfam
Location: 22648 - 23745 (-)
Gene ID: HRGMv2_4055_6_23
Type: TC
Location: 23757 - 24515 (-)
Type: TC
Location: 23757 - 24515 (-)
Gene ID: HRGMv2_4055_6_24
Type: TC
Location: 24526 - 25329 (-)
Type: TC
Location: 24526 - 25329 (-)
Gene ID: HRGMv2_4055_6_25
Type: CAZyme
Location: 25368 - 26483 (-)
Type: CAZyme
Location: 25368 - 26483 (-)
Gene ID: HRGMv2_4055_6_26
Type: TC
Location: 26483 - 27172 (-)
Type: TC
Location: 26483 - 27172 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.