Cluster: HRGMv2_4055_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4055
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4055_3 | HRGMv2_4055_3_19 | 18060 | 20027 | - | GH31_4 |
| NULL(UNKNOWN) | HRGMv2_4055_3 | HRGMv2_4055_3_20 | 20044 | 20442 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4055_3 | HRGMv2_4055_3_21 | 20598 | 21251 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4055_3 | HRGMv2_4055_3_22 | 21269 | 23866 | + | 3.A.9.1.2 |
| pfam | HRGMv2_4055_3 | HRGMv2_4055_3_23 | 23961 | 24497 | - | DUF3788 |
| TC | HRGMv2_4055_3 | HRGMv2_4055_3_24 | 24501 | 25274 | - | 1.C.109.1.1 |
Gene ID: HRGMv2_4055_3_19
Type: CAZyme
Location: 18060 - 20027 (-)
Type: CAZyme
Location: 18060 - 20027 (-)
Gene ID: HRGMv2_4055_3_20
Type:
Location: 20044 - 20442 (-)
Type:
Location: 20044 - 20442 (-)
Gene ID: HRGMv2_4055_3_21
Type:
Location: 20598 - 21251 (+)
Type:
Location: 20598 - 21251 (+)
Gene ID: HRGMv2_4055_3_22
Type: TC
Location: 21269 - 23866 (+)
Type: TC
Location: 21269 - 23866 (+)
Gene ID: HRGMv2_4055_3_23
Type: pfam
Location: 23961 - 24497 (-)
Type: pfam
Location: 23961 - 24497 (-)
Gene ID: HRGMv2_4055_3_24
Type: TC
Location: 24501 - 25274 (-)
Type: TC
Location: 24501 - 25274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.