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Cluster: HRGMv2_4055_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4055_64 HRGMv2_4055_64_2 732 1625 - 3.A.1.1.6
TC HRGMv2_4055_64 HRGMv2_4055_64_3 1625 2647 - 3.A.1.1.20
STP HRGMv2_4055_64 HRGMv2_4055_64_4 2669 4237 - SBP_bac_1
NULL(UNKNOWN) HRGMv2_4055_64 HRGMv2_4055_64_5 4259 6637 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4055_64 HRGMv2_4055_64_6 7214 10057 - GH106
NULL(UNKNOWN) HRGMv2_4055_64 HRGMv2_4055_64_7 10141 10491 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4055_64 HRGMv2_4055_64_8 10888 11730 - 3.A.1.1.11
TC HRGMv2_4055_64 HRGMv2_4055_64_9 11730 12647 - 3.A.1.1.11
Gene ID: HRGMv2_4055_64_2
Type: TC
Location: 732 - 1625 (-)
Gene ID: HRGMv2_4055_64_3
Type: TC
Location: 1625 - 2647 (-)
Gene ID: HRGMv2_4055_64_4
Type: STP
Location: 2669 - 4237 (-)
Gene ID: HRGMv2_4055_64_5
Type:
Location: 4259 - 6637 (-)
Gene ID: HRGMv2_4055_64_6
Type: CAZyme
Location: 7214 - 10057 (-)
Gene ID: HRGMv2_4055_64_7
Type:
Location: 10141 - 10491 (+)
Gene ID: HRGMv2_4055_64_8
Type: TC
Location: 10888 - 11730 (-)
Gene ID: HRGMv2_4055_64_9
Type: TC
Location: 11730 - 12647 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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