Cluster: HRGMv2_4055_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4055
- CGC Family ID: CGCFAM_00037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4055_56 | HRGMv2_4055_56_2 | 950 | 2635 | + | CBM34 | GH13_20 |
| TC | HRGMv2_4055_56 | HRGMv2_4055_56_3 | 2637 | 4100 | + | 3.A.1.1.26 |
| TC | HRGMv2_4055_56 | HRGMv2_4055_56_4 | 4112 | 5494 | + | 3.A.1.1.27 |
| TC | HRGMv2_4055_56 | HRGMv2_4055_56_5 | 5491 | 6333 | + | 3.A.1.1.27 |
Gene ID: HRGMv2_4055_56_2
Type: CAZyme
Location: 950 - 2635 (+)
Type: CAZyme
Location: 950 - 2635 (+)
Gene ID: HRGMv2_4055_56_3
Type: TC
Location: 2637 - 4100 (+)
Type: TC
Location: 2637 - 4100 (+)
Gene ID: HRGMv2_4055_56_4
Type: TC
Location: 4112 - 5494 (+)
Type: TC
Location: 4112 - 5494 (+)
Gene ID: HRGMv2_4055_56_5
Type: TC
Location: 5491 - 6333 (+)
Type: TC
Location: 5491 - 6333 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.