Cluster: HRGMv2_4055_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4055
- CGC Family ID: CGCFAM_00030
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4055_45 | HRGMv2_4055_45_7 | 8711 | 9685 | + | 3.A.1.1.9 |
| TC | HRGMv2_4055_45 | HRGMv2_4055_45_8 | 9695 | 10579 | + | 3.A.1.1.9 |
| pfam | HRGMv2_4055_45 | HRGMv2_4055_45_9 | 10591 | 13254 | + | Big_3 |
| CAZyme | HRGMv2_4055_45 | HRGMv2_4055_45_10 | 13297 | 15336 | + | CBM67 | GH78 |
| pfam | HRGMv2_4055_45 | HRGMv2_4055_45_11 | 15333 | 16082 | + | Creatininase |
| CAZyme | HRGMv2_4055_45 | HRGMv2_4055_45_12 | 16069 | 17859 | + | GH36 |
Gene ID: HRGMv2_4055_45_7
Type: TC
Location: 8711 - 9685 (+)
Type: TC
Location: 8711 - 9685 (+)
Gene ID: HRGMv2_4055_45_8
Type: TC
Location: 9695 - 10579 (+)
Type: TC
Location: 9695 - 10579 (+)
Gene ID: HRGMv2_4055_45_9
Type: pfam
Location: 10591 - 13254 (+)
Type: pfam
Location: 10591 - 13254 (+)
Gene ID: HRGMv2_4055_45_10
Type: CAZyme
Location: 13297 - 15336 (+)
Type: CAZyme
Location: 13297 - 15336 (+)
Gene ID: HRGMv2_4055_45_11
Type: pfam
Location: 15333 - 16082 (+)
Type: pfam
Location: 15333 - 16082 (+)
Gene ID: HRGMv2_4055_45_12
Type: CAZyme
Location: 16069 - 17859 (+)
Type: CAZyme
Location: 16069 - 17859 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.