Cluster: HRGMv2_4055_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4055
- CGC Family ID: CGCFAM_00350
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4055_43 | HRGMv2_4055_43_2 | 240 | 3050 | - | GH106 |
| CAZyme | HRGMv2_4055_43 | HRGMv2_4055_43_3 | 3220 | 5835 | - | CBM67 | GH78 |
| pfam | HRGMv2_4055_43 | HRGMv2_4055_43_4 | 5875 | 9156 | - | Big_2 | Big_2 |
| NULL(UNKNOWN) | HRGMv2_4055_43 | HRGMv2_4055_43_5 | 9181 | 11109 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4055_43 | HRGMv2_4055_43_6 | 11123 | 12022 | - | 3.A.1.1.11 |
| TC | HRGMv2_4055_43 | HRGMv2_4055_43_7 | 12024 | 12998 | - | 3.A.1.1.48 |
Gene ID: HRGMv2_4055_43_2
Type: CAZyme
Location: 240 - 3050 (-)
Type: CAZyme
Location: 240 - 3050 (-)
Gene ID: HRGMv2_4055_43_3
Type: CAZyme
Location: 3220 - 5835 (-)
Type: CAZyme
Location: 3220 - 5835 (-)
Gene ID: HRGMv2_4055_43_4
Type: pfam
Location: 5875 - 9156 (-)
Type: pfam
Location: 5875 - 9156 (-)
Gene ID: HRGMv2_4055_43_5
Type:
Location: 9181 - 11109 (-)
Type:
Location: 9181 - 11109 (-)
Gene ID: HRGMv2_4055_43_6
Type: TC
Location: 11123 - 12022 (-)
Type: TC
Location: 11123 - 12022 (-)
Gene ID: HRGMv2_4055_43_7
Type: TC
Location: 12024 - 12998 (-)
Type: TC
Location: 12024 - 12998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.