Cluster: HRGMv2_4055_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4055
- CGC Family ID: CGCFAM_02072
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4055_34 | HRGMv2_4055_34_1 | 1 | 1569 | - | GH3 |
| TC | HRGMv2_4055_34 | HRGMv2_4055_34_2 | 1654 | 3282 | - | 2.A.21.2.3 |
| TC | HRGMv2_4055_34 | HRGMv2_4055_34_3 | 3611 | 4984 | - | 2.A.66.1.33 |
| CAZyme | HRGMv2_4055_34 | HRGMv2_4055_34_4 | 5156 | 6472 | - | GH13_20 |
| TC | HRGMv2_4055_34 | HRGMv2_4055_34_5 | 6651 | 7958 | + | 2.A.37.2.2 |
Gene ID: HRGMv2_4055_34_1
Type: CAZyme
Location: 1 - 1569 (-)
Type: CAZyme
Location: 1 - 1569 (-)
Gene ID: HRGMv2_4055_34_2
Type: TC
Location: 1654 - 3282 (-)
Type: TC
Location: 1654 - 3282 (-)
Gene ID: HRGMv2_4055_34_3
Type: TC
Location: 3611 - 4984 (-)
Type: TC
Location: 3611 - 4984 (-)
Gene ID: HRGMv2_4055_34_4
Type: CAZyme
Location: 5156 - 6472 (-)
Type: CAZyme
Location: 5156 - 6472 (-)
Gene ID: HRGMv2_4055_34_5
Type: TC
Location: 6651 - 7958 (+)
Type: TC
Location: 6651 - 7958 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944328845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.