Cluster: HRGMv2_4054_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4054
- CGC Family ID: CGCFAM_01116
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4054_18 | HRGMv2_4054_18_26 | 32678 | 33613 | - | 3.A.1.1.11 |
| TC | HRGMv2_4054_18 | HRGMv2_4054_18_27 | 33625 | 34605 | - | 3.A.1.1.20 |
| STP | HRGMv2_4054_18 | HRGMv2_4054_18_28 | 34636 | 36087 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4054_18 | HRGMv2_4054_18_29 | 36216 | 37718 | - | GH51_1 |
Gene ID: HRGMv2_4054_18_26
Type: TC
Location: 32678 - 33613 (-)
Type: TC
Location: 32678 - 33613 (-)
Gene ID: HRGMv2_4054_18_27
Type: TC
Location: 33625 - 34605 (-)
Type: TC
Location: 33625 - 34605 (-)
Gene ID: HRGMv2_4054_18_28
Type: STP
Location: 34636 - 36087 (-)
Type: STP
Location: 34636 - 36087 (-)
Gene ID: HRGMv2_4054_18_29
Type: CAZyme
Location: 36216 - 37718 (-)
Type: CAZyme
Location: 36216 - 37718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.