Cluster: HRGMv2_4054_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4054
- CGC Family ID: CGCFAM_07466
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4054_14 | HRGMv2_4054_14_3 | 2065 | 3924 | - | GH20 |
| NULL(UNKNOWN) | HRGMv2_4054_14 | HRGMv2_4054_14_4 | 3955 | 8217 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4054_14 | HRGMv2_4054_14_5 | 8219 | 9163 | - | 3.A.1.1.22 |
| STP | HRGMv2_4054_14 | HRGMv2_4054_14_6 | 9184 | 10620 | - | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_4054_14 | HRGMv2_4054_14_7 | 10656 | 12029 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4054_14 | HRGMv2_4054_14_8 | 12053 | 13114 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_4054_14_3
Type: CAZyme
Location: 2065 - 3924 (-)
Type: CAZyme
Location: 2065 - 3924 (-)
Gene ID: HRGMv2_4054_14_4
Type:
Location: 3955 - 8217 (-)
Type:
Location: 3955 - 8217 (-)
Gene ID: HRGMv2_4054_14_5
Type: TC
Location: 8219 - 9163 (-)
Type: TC
Location: 8219 - 9163 (-)
Gene ID: HRGMv2_4054_14_6
Type: STP
Location: 9184 - 10620 (-)
Type: STP
Location: 9184 - 10620 (-)
Gene ID: HRGMv2_4054_14_7
Type:
Location: 10656 - 12029 (-)
Type:
Location: 10656 - 12029 (-)
Gene ID: HRGMv2_4054_14_8
Type: TC
Location: 12053 - 13114 (-)
Type: TC
Location: 12053 - 13114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.