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Cluster: HRGMv2_4054_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4054_78 HRGMv2_4054_78_1 79 2052 + GH3
pfam HRGMv2_4054_78 HRGMv2_4054_78_2 2066 2671 + DUF218
sulfatase HRGMv2_4054_78 HRGMv2_4054_78_3 2684 4708 + S1_4
CAZyme HRGMv2_4054_78 HRGMv2_4054_78_4 4722 6020 + GH1
TC HRGMv2_4054_78 HRGMv2_4054_78_5 6068 6718 + 9.B.20.1.4
pfam HRGMv2_4054_78 HRGMv2_4054_78_6 6781 7611 + Lactamase_B_2
CAZyme HRGMv2_4054_78 HRGMv2_4054_78_7 7687 9867 + GH36
peptidase HRGMv2_4054_78 HRGMv2_4054_78_8 9872 10705 + S09.UPW
CAZyme HRGMv2_4054_78 HRGMv2_4054_78_9 10746 11600 + GH20
Gene ID: HRGMv2_4054_78_1
Type: CAZyme
Location: 79 - 2052 (+)
Gene ID: HRGMv2_4054_78_2
Type: pfam
Location: 2066 - 2671 (+)
Gene ID: HRGMv2_4054_78_3
Type: sulfatase
Location: 2684 - 4708 (+)
Gene ID: HRGMv2_4054_78_4
Type: CAZyme
Location: 4722 - 6020 (+)
Gene ID: HRGMv2_4054_78_5
Type: TC
Location: 6068 - 6718 (+)
Gene ID: HRGMv2_4054_78_6
Type: pfam
Location: 6781 - 7611 (+)
Gene ID: HRGMv2_4054_78_7
Type: CAZyme
Location: 7687 - 9867 (+)
Gene ID: HRGMv2_4054_78_8
Type: peptidase
Location: 9872 - 10705 (+)
Gene ID: HRGMv2_4054_78_9
Type: CAZyme
Location: 10746 - 11600 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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