Cluster: HRGMv2_4054_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4054_73 | HRGMv2_4054_73_1 | 2 | 670 | - | GH1 |
| pfam | HRGMv2_4054_73 | HRGMv2_4054_73_2 | 683 | 1735 | - | Lipase_GDSL | Lipase_GDSL_2 |
| pfam | HRGMv2_4054_73 | HRGMv2_4054_73_3 | 1820 | 4972 | - | Big_2 |
| CAZyme | HRGMv2_4054_73 | HRGMv2_4054_73_4 | 4994 | 6946 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_4054_73 | HRGMv2_4054_73_5 | 6965 | 9940 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4054_73 | HRGMv2_4054_73_6 | 9962 | 10861 | - | 3.A.1.1.6 |
Gene ID: HRGMv2_4054_73_1
Type: CAZyme
Location: 2 - 670 (-)
Type: CAZyme
Location: 2 - 670 (-)
Gene ID: HRGMv2_4054_73_2
Type: pfam
Location: 683 - 1735 (-)
Type: pfam
Location: 683 - 1735 (-)
Gene ID: HRGMv2_4054_73_3
Type: pfam
Location: 1820 - 4972 (-)
Type: pfam
Location: 1820 - 4972 (-)
Gene ID: HRGMv2_4054_73_4
Type: CAZyme
Location: 4994 - 6946 (-)
Type: CAZyme
Location: 4994 - 6946 (-)
Gene ID: HRGMv2_4054_73_5
Type:
Location: 6965 - 9940 (-)
Type:
Location: 6965 - 9940 (-)
Gene ID: HRGMv2_4054_73_6
Type: TC
Location: 9962 - 10861 (-)
Type: TC
Location: 9962 - 10861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.