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Cluster: HRGMv2_4054_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4054_44 HRGMv2_4054_44_3 2064 3416 - GH32
NULL(UNKNOWN) HRGMv2_4054_44 HRGMv2_4054_44_4 3470 7324 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4054_44 HRGMv2_4054_44_5 7346 9865 - CBM38 | CBM38 | CBM38 | CBM38
CAZyme HRGMv2_4054_44 HRGMv2_4054_44_6 9876 12341 - GH32
TC HRGMv2_4054_44 HRGMv2_4054_44_7 12352 13236 - 3.A.1.1.20
TC HRGMv2_4054_44 HRGMv2_4054_44_8 13238 14221 - 3.A.1.1.20
TC HRGMv2_4054_44 HRGMv2_4054_44_9 14231 15562 - 3.A.1.1.20
TF HRGMv2_4054_44 HRGMv2_4054_44_10 15590 16585 - LacI
CAZyme HRGMv2_4054_44 HRGMv2_4054_44_11 16588 19734 - CBM66 | GH32
Gene ID: HRGMv2_4054_44_3
Type: CAZyme
Location: 2064 - 3416 (-)
Gene ID: HRGMv2_4054_44_4
Type:
Location: 3470 - 7324 (-)
Gene ID: HRGMv2_4054_44_5
Type: CAZyme
Location: 7346 - 9865 (-)
Gene ID: HRGMv2_4054_44_6
Type: CAZyme
Location: 9876 - 12341 (-)
Gene ID: HRGMv2_4054_44_7
Type: TC
Location: 12352 - 13236 (-)
Gene ID: HRGMv2_4054_44_8
Type: TC
Location: 13238 - 14221 (-)
Gene ID: HRGMv2_4054_44_9
Type: TC
Location: 14231 - 15562 (-)
Gene ID: HRGMv2_4054_44_10
Type: TF
Location: 15590 - 16585 (-)
Gene ID: HRGMv2_4054_44_11
Type: CAZyme
Location: 16588 - 19734 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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