Cluster: HRGMv2_4054_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4054
- CGC Family ID: CGCFAM_00976
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4054_37 | HRGMv2_4054_37_14 | 16247 | 17260 | + | GH130_5 |
| STP | HRGMv2_4054_37 | HRGMv2_4054_37_15 | 17272 | 18624 | + | SBP_bac_1 |
| TC | HRGMv2_4054_37 | HRGMv2_4054_37_16 | 18677 | 19585 | + | 3.A.1.1.20 |
| TC | HRGMv2_4054_37 | HRGMv2_4054_37_17 | 19582 | 20448 | + | 3.A.1.1.41 |
Gene ID: HRGMv2_4054_37_14
Type: CAZyme
Location: 16247 - 17260 (+)
Type: CAZyme
Location: 16247 - 17260 (+)
Gene ID: HRGMv2_4054_37_15
Type: STP
Location: 17272 - 18624 (+)
Type: STP
Location: 17272 - 18624 (+)
Gene ID: HRGMv2_4054_37_16
Type: TC
Location: 18677 - 19585 (+)
Type: TC
Location: 18677 - 19585 (+)
Gene ID: HRGMv2_4054_37_17
Type: TC
Location: 19582 - 20448 (+)
Type: TC
Location: 19582 - 20448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.