Cluster: HRGMv2_4054_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4054
- CGC Family ID: CGCFAM_00308
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4054_5 | HRGMv2_4054_5_3 | 1253 | 2719 | - | GH43_4 |
| CAZyme | HRGMv2_4054_5 | HRGMv2_4054_5_4 | 3004 | 5013 | - | GH43_4 |
| NULL(UNKNOWN) | HRGMv2_4054_5 | HRGMv2_4054_5_5 | 5125 | 6657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4054_5 | HRGMv2_4054_5_6 | 6853 | 9075 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4054_5 | HRGMv2_4054_5_7 | 9325 | 10365 | - | 3.A.1.1.20 |
| TC | HRGMv2_4054_5 | HRGMv2_4054_5_8 | 10362 | 11381 | - | 3.A.1.1.34 |
Gene ID: HRGMv2_4054_5_3
Type: CAZyme
Location: 1253 - 2719 (-)
Type: CAZyme
Location: 1253 - 2719 (-)
Gene ID: HRGMv2_4054_5_4
Type: CAZyme
Location: 3004 - 5013 (-)
Type: CAZyme
Location: 3004 - 5013 (-)
Gene ID: HRGMv2_4054_5_5
Type:
Location: 5125 - 6657 (-)
Type:
Location: 5125 - 6657 (-)
Gene ID: HRGMv2_4054_5_6
Type:
Location: 6853 - 9075 (-)
Type:
Location: 6853 - 9075 (-)
Gene ID: HRGMv2_4054_5_7
Type: TC
Location: 9325 - 10365 (-)
Type: TC
Location: 9325 - 10365 (-)
Gene ID: HRGMv2_4054_5_8
Type: TC
Location: 10362 - 11381 (-)
Type: TC
Location: 10362 - 11381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.