Cluster: HRGMv2_4054_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4054_37 | HRGMv2_4054_37_3 | 3024 | 3986 | + | 3.A.1.1.11 |
| TC | HRGMv2_4054_37 | HRGMv2_4054_37_4 | 3973 | 4821 | + | 3.A.1.1.11 |
| STP | HRGMv2_4054_37 | HRGMv2_4054_37_5 | 4845 | 6104 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4054_37 | HRGMv2_4054_37_6 | 6123 | 8471 | + | GH99 |
| CAZyme | HRGMv2_4054_37 | HRGMv2_4054_37_7 | 8480 | 9460 | + | GH130_5 |
| CAZyme | HRGMv2_4054_37 | HRGMv2_4054_37_8 | 9457 | 10539 | + | GH99 |
Gene ID: HRGMv2_4054_37_3
Type: TC
Location: 3024 - 3986 (+)
Type: TC
Location: 3024 - 3986 (+)
Gene ID: HRGMv2_4054_37_4
Type: TC
Location: 3973 - 4821 (+)
Type: TC
Location: 3973 - 4821 (+)
Gene ID: HRGMv2_4054_37_5
Type: STP
Location: 4845 - 6104 (+)
Type: STP
Location: 4845 - 6104 (+)
Gene ID: HRGMv2_4054_37_6
Type: CAZyme
Location: 6123 - 8471 (+)
Type: CAZyme
Location: 6123 - 8471 (+)
Gene ID: HRGMv2_4054_37_7
Type: CAZyme
Location: 8480 - 9460 (+)
Type: CAZyme
Location: 8480 - 9460 (+)
Gene ID: HRGMv2_4054_37_8
Type: CAZyme
Location: 9457 - 10539 (+)
Type: CAZyme
Location: 9457 - 10539 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.