Cluster: HRGMv2_4054_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4054
- CGC Family ID: CGCFAM_00408
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4054_24 | HRGMv2_4054_24_20 | 23153 | 24157 | + | 3.A.1.1.11 |
| TC | HRGMv2_4054_24 | HRGMv2_4054_24_21 | 24174 | 25067 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_4054_24 | HRGMv2_4054_24_22 | 25128 | 27179 | + | GH43 |
Gene ID: HRGMv2_4054_24_20
Type: TC
Location: 23153 - 24157 (+)
Type: TC
Location: 23153 - 24157 (+)
Gene ID: HRGMv2_4054_24_21
Type: TC
Location: 24174 - 25067 (+)
Type: TC
Location: 24174 - 25067 (+)
Gene ID: HRGMv2_4054_24_22
Type: CAZyme
Location: 25128 - 27179 (+)
Type: CAZyme
Location: 25128 - 27179 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.