Cluster: HRGMv2_4054_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4054
- CGC Family ID: CGCFAM_00561
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4054_19 | HRGMv2_4054_19_18 | 17734 | 20139 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_4054_19 | HRGMv2_4054_19_19 | 20176 | 21864 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4054_19 | HRGMv2_4054_19_20 | 21877 | 22815 | + | BPD_transp_1 |
| TC | HRGMv2_4054_19 | HRGMv2_4054_19_21 | 22816 | 23700 | + | 3.A.1.1.18 |
| NULL(UNKNOWN) | HRGMv2_4054_19 | HRGMv2_4054_19_22 | 23724 | 26726 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4054_19 | HRGMv2_4054_19_23 | 26743 | 28620 | + | GH163 |
Gene ID: HRGMv2_4054_19_18
Type: CAZyme
Location: 17734 - 20139 (+)
Type: CAZyme
Location: 17734 - 20139 (+)
Gene ID: HRGMv2_4054_19_19
Type:
Location: 20176 - 21864 (+)
Type:
Location: 20176 - 21864 (+)
Gene ID: HRGMv2_4054_19_20
Type: pfam
Location: 21877 - 22815 (+)
Type: pfam
Location: 21877 - 22815 (+)
Gene ID: HRGMv2_4054_19_21
Type: TC
Location: 22816 - 23700 (+)
Type: TC
Location: 22816 - 23700 (+)
Gene ID: HRGMv2_4054_19_22
Type:
Location: 23724 - 26726 (+)
Type:
Location: 23724 - 26726 (+)
Gene ID: HRGMv2_4054_19_23
Type: CAZyme
Location: 26743 - 28620 (+)
Type: CAZyme
Location: 26743 - 28620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.