Cluster: HRGMv2_4054_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4054_3 | HRGMv2_4054_3_55 | 46917 | 47999 | + | 3.A.1.1.20 |
| TC | HRGMv2_4054_3 | HRGMv2_4054_3_56 | 48019 | 48927 | + | 3.A.1.1.46 |
| CAZyme | HRGMv2_4054_3 | HRGMv2_4054_3_57 | 48968 | 51142 | + | GH43 |
| pfam | HRGMv2_4054_3 | HRGMv2_4054_3_58 | 51157 | 57297 | + | CarboxypepD_reg | Flg_new_2 | Flg_new_2 | Flg_new_2 | Flg_new_2 |
| pfam | HRGMv2_4054_3 | HRGMv2_4054_3_59 | 57391 | 58218 | + | GDPD | DUF4996 |
| CAZyme | HRGMv2_4054_3 | HRGMv2_4054_3_60 | 58248 | 60785 | + | GH31 |
Gene ID: HRGMv2_4054_3_55
Type: TC
Location: 46917 - 47999 (+)
Type: TC
Location: 46917 - 47999 (+)
Gene ID: HRGMv2_4054_3_56
Type: TC
Location: 48019 - 48927 (+)
Type: TC
Location: 48019 - 48927 (+)
Gene ID: HRGMv2_4054_3_57
Type: CAZyme
Location: 48968 - 51142 (+)
Type: CAZyme
Location: 48968 - 51142 (+)
Gene ID: HRGMv2_4054_3_58
Type: pfam
Location: 51157 - 57297 (+)
Type: pfam
Location: 51157 - 57297 (+)
Gene ID: HRGMv2_4054_3_59
Type: pfam
Location: 57391 - 58218 (+)
Type: pfam
Location: 57391 - 58218 (+)
Gene ID: HRGMv2_4054_3_60
Type: CAZyme
Location: 58248 - 60785 (+)
Type: CAZyme
Location: 58248 - 60785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp017886545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.