Cluster: HRGMv2_4053_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4053
- CGC Family ID: CGCFAM_05418
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4053_67 | HRGMv2_4053_67_3 | 4286 | 5212 | + | 3.A.1.105.13 |
| TC | HRGMv2_4053_67 | HRGMv2_4053_67_4 | 5209 | 6120 | + | 3.A.1.130.1 |
| pfam | HRGMv2_4053_67 | HRGMv2_4053_67_5 | 6166 | 7179 | + | URO-D |
| pfam | HRGMv2_4053_67 | HRGMv2_4053_67_6 | 7180 | 7827 | + | Hexapep | Mac | Hexapep_2 |
| CAZyme | HRGMv2_4053_67 | HRGMv2_4053_67_7 | 7824 | 9896 | + | CBM67 | GH78 |
Gene ID: HRGMv2_4053_67_3
Type: TC
Location: 4286 - 5212 (+)
Type: TC
Location: 4286 - 5212 (+)
Gene ID: HRGMv2_4053_67_4
Type: TC
Location: 5209 - 6120 (+)
Type: TC
Location: 5209 - 6120 (+)
Gene ID: HRGMv2_4053_67_5
Type: pfam
Location: 6166 - 7179 (+)
Type: pfam
Location: 6166 - 7179 (+)
Gene ID: HRGMv2_4053_67_6
Type: pfam
Location: 7180 - 7827 (+)
Type: pfam
Location: 7180 - 7827 (+)
Gene ID: HRGMv2_4053_67_7
Type: CAZyme
Location: 7824 - 9896 (+)
Type: CAZyme
Location: 7824 - 9896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
HGM11417
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.