Cluster: HRGMv2_4053_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4053
- CGC Family ID: CGCFAM_00041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4053_7 | HRGMv2_4053_7_8 | 10996 | 11910 | + | 3.A.1.1.11 |
| TC | HRGMv2_4053_7 | HRGMv2_4053_7_9 | 11912 | 12811 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_4053_7 | HRGMv2_4053_7_10 | 12828 | 15122 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4053_7 | HRGMv2_4053_7_11 | 15186 | 16952 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4053_7 | HRGMv2_4053_7_12 | 17028 | 20066 | + | GH28 |
Gene ID: HRGMv2_4053_7_8
Type: TC
Location: 10996 - 11910 (+)
Type: TC
Location: 10996 - 11910 (+)
Gene ID: HRGMv2_4053_7_9
Type: TC
Location: 11912 - 12811 (+)
Type: TC
Location: 11912 - 12811 (+)
Gene ID: HRGMv2_4053_7_10
Type:
Location: 12828 - 15122 (+)
Type:
Location: 12828 - 15122 (+)
Gene ID: HRGMv2_4053_7_11
Type:
Location: 15186 - 16952 (+)
Type:
Location: 15186 - 16952 (+)
Gene ID: HRGMv2_4053_7_12
Type: CAZyme
Location: 17028 - 20066 (+)
Type: CAZyme
Location: 17028 - 20066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
HGM11417
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.