Cluster: HRGMv2_4053_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4053
- CGC Family ID: CGCFAM_03218
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4053_118 | HRGMv2_4053_118_2 | 1156 | 2118 | + | 3.A.1.1.45 |
| TC | HRGMv2_4053_118 | HRGMv2_4053_118_3 | 2118 | 2978 | + | 3.A.1.1.25 |
| CAZyme | HRGMv2_4053_118 | HRGMv2_4053_118_4 | 2991 | 4136 | + | CE2 |
| CAZyme | HRGMv2_4053_118 | HRGMv2_4053_118_5 | 4146 | 6398 | + | GH65 |
Gene ID: HRGMv2_4053_118_2
Type: TC
Location: 1156 - 2118 (+)
Type: TC
Location: 1156 - 2118 (+)
Gene ID: HRGMv2_4053_118_3
Type: TC
Location: 2118 - 2978 (+)
Type: TC
Location: 2118 - 2978 (+)
Gene ID: HRGMv2_4053_118_4
Type: CAZyme
Location: 2991 - 4136 (+)
Type: CAZyme
Location: 2991 - 4136 (+)
Gene ID: HRGMv2_4053_118_5
Type: CAZyme
Location: 4146 - 6398 (+)
Type: CAZyme
Location: 4146 - 6398 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
HGM11417
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.