Cluster: HRGMv2_4053_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4053
- CGC Family ID: CGCFAM_00142
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4053_86 | HRGMv2_4053_86_1 | 190 | 1206 | + | GH179 |
| pfam | HRGMv2_4053_86 | HRGMv2_4053_86_2 | 1219 | 2040 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4053_86 | HRGMv2_4053_86_3 | 2033 | 3007 | + | GH179 |
| NULL(UNKNOWN) | HRGMv2_4053_86 | HRGMv2_4053_86_4 | 3027 | 6302 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4053_86 | HRGMv2_4053_86_5 | 6329 | 6598 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4053_86 | HRGMv2_4053_86_6 | 6647 | 7501 | + | 3.A.1.1.18 |
Gene ID: HRGMv2_4053_86_1
Type: CAZyme
Location: 190 - 1206 (+)
Type: CAZyme
Location: 190 - 1206 (+)
Gene ID: HRGMv2_4053_86_2
Type: pfam
Location: 1219 - 2040 (+)
Type: pfam
Location: 1219 - 2040 (+)
Gene ID: HRGMv2_4053_86_3
Type: CAZyme
Location: 2033 - 3007 (+)
Type: CAZyme
Location: 2033 - 3007 (+)
Gene ID: HRGMv2_4053_86_4
Type:
Location: 3027 - 6302 (+)
Type:
Location: 3027 - 6302 (+)
Gene ID: HRGMv2_4053_86_5
Type:
Location: 6329 - 6598 (+)
Type:
Location: 6329 - 6598 (+)
Gene ID: HRGMv2_4053_86_6
Type: TC
Location: 6647 - 7501 (+)
Type: TC
Location: 6647 - 7501 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
HGM11417
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.