Cluster: HRGMv2_4053_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4053
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4053_4 | HRGMv2_4053_4_11 | 12515 | 13969 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | HRGMv2_4053_4 | HRGMv2_4053_4_12 | 14009 | 15445 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4053_4 | HRGMv2_4053_4_13 | 15449 | 16522 | - | GT4 |
| CAZyme | HRGMv2_4053_4 | HRGMv2_4053_4_14 | 16546 | 17661 | - | GT4 |
| pfam | HRGMv2_4053_4 | HRGMv2_4053_4_15 | 17676 | 18956 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_4053_4 | HRGMv2_4053_4_16 | 18953 | 19879 | - | GT2 |
| TC | HRGMv2_4053_4 | HRGMv2_4053_4_17 | 19885 | 20661 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_4053_4_11
Type: TC
Location: 12515 - 13969 (-)
Type: TC
Location: 12515 - 13969 (-)
Gene ID: HRGMv2_4053_4_12
Type:
Location: 14009 - 15445 (-)
Type:
Location: 14009 - 15445 (-)
Gene ID: HRGMv2_4053_4_13
Type: CAZyme
Location: 15449 - 16522 (-)
Type: CAZyme
Location: 15449 - 16522 (-)
Gene ID: HRGMv2_4053_4_14
Type: CAZyme
Location: 16546 - 17661 (-)
Type: CAZyme
Location: 16546 - 17661 (-)
Gene ID: HRGMv2_4053_4_15
Type: pfam
Location: 17676 - 18956 (-)
Type: pfam
Location: 17676 - 18956 (-)
Gene ID: HRGMv2_4053_4_16
Type: CAZyme
Location: 18953 - 19879 (-)
Type: CAZyme
Location: 18953 - 19879 (-)
Gene ID: HRGMv2_4053_4_17
Type: TC
Location: 19885 - 20661 (-)
Type: TC
Location: 19885 - 20661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
HGM11417
Genus
HGM11417
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.