Cluster: HRGMv2_4052_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4052
- CGC Family ID: CGCFAM_00449
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4052_2 | HRGMv2_4052_2_106 | 97095 | 98216 | - | 2.A.7.3.49 |
| NULL(UNKNOWN) | HRGMv2_4052_2 | HRGMv2_4052_2_107 | 98230 | 98511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4052_2 | HRGMv2_4052_2_108 | 98589 | 99017 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4052_2 | HRGMv2_4052_2_109 | 99064 | 100116 | + | GT28 |
| TC | HRGMv2_4052_2 | HRGMv2_4052_2_110 | 100143 | 101324 | - | 2.A.103.1.3 |
| pfam | HRGMv2_4052_2 | HRGMv2_4052_2_111 | 101321 | 102652 | - | Mur_ligase_M |
| TC | HRGMv2_4052_2 | HRGMv2_4052_2_112 | 102649 | 103647 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_4052_2_106
Type: TC
Location: 97095 - 98216 (-)
Type: TC
Location: 97095 - 98216 (-)
Gene ID: HRGMv2_4052_2_107
Type:
Location: 98230 - 98511 (-)
Type:
Location: 98230 - 98511 (-)
Gene ID: HRGMv2_4052_2_108
Type:
Location: 98589 - 99017 (+)
Type:
Location: 98589 - 99017 (+)
Gene ID: HRGMv2_4052_2_109
Type: CAZyme
Location: 99064 - 100116 (+)
Type: CAZyme
Location: 99064 - 100116 (+)
Gene ID: HRGMv2_4052_2_110
Type: TC
Location: 100143 - 101324 (-)
Type: TC
Location: 100143 - 101324 (-)
Gene ID: HRGMv2_4052_2_111
Type: pfam
Location: 101321 - 102652 (-)
Type: pfam
Location: 101321 - 102652 (-)
Gene ID: HRGMv2_4052_2_112
Type: TC
Location: 102649 - 103647 (-)
Type: TC
Location: 102649 - 103647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1242
Genus
UMGS687
Species
UMGS687 sp944380415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.