Cluster: HRGMv2_4051_CGC40
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4051
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4051_99 | HRGMv2_4051_99_2 | 1112 | 2056 | + | 3.A.1.132.1 |
| TC | HRGMv2_4051_99 | HRGMv2_4051_99_3 | 2059 | 2778 | + | 3.A.1.132.1 |
| pfam | HRGMv2_4051_99 | HRGMv2_4051_99_4 | 2784 | 4277 | + | ABC_transp_aux | DUF7088 |
| pfam | HRGMv2_4051_99 | HRGMv2_4051_99_5 | 4278 | 6110 | + | DUF4340 | DUF4340 |
| CAZyme | HRGMv2_4051_99 | HRGMv2_4051_99_6 | 6209 | 7186 | + | CE7 |
| STP | HRGMv2_4051_99 | HRGMv2_4051_99_7 | 7261 | 8268 | - | GGDEF |
| pfam | HRGMv2_4051_99 | HRGMv2_4051_99_8 | 8568 | 10088 | + | CoA_trans | CoA_trans |
| TC | HRGMv2_4051_99 | HRGMv2_4051_99_9 | 10142 | 10966 | + | 1.A.23.2.1 |
Gene ID: HRGMv2_4051_99_2
Type: TC
Location: 1112 - 2056 (+)
Type: TC
Location: 1112 - 2056 (+)
Gene ID: HRGMv2_4051_99_3
Type: TC
Location: 2059 - 2778 (+)
Type: TC
Location: 2059 - 2778 (+)
Gene ID: HRGMv2_4051_99_4
Type: pfam
Location: 2784 - 4277 (+)
Type: pfam
Location: 2784 - 4277 (+)
Gene ID: HRGMv2_4051_99_5
Type: pfam
Location: 4278 - 6110 (+)
Type: pfam
Location: 4278 - 6110 (+)
Gene ID: HRGMv2_4051_99_6
Type: CAZyme
Location: 6209 - 7186 (+)
Type: CAZyme
Location: 6209 - 7186 (+)
Gene ID: HRGMv2_4051_99_7
Type: STP
Location: 7261 - 8268 (-)
Type: STP
Location: 7261 - 8268 (-)
Gene ID: HRGMv2_4051_99_8
Type: pfam
Location: 8568 - 10088 (+)
Type: pfam
Location: 8568 - 10088 (+)
Gene ID: HRGMv2_4051_99_9
Type: TC
Location: 10142 - 10966 (+)
Type: TC
Location: 10142 - 10966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
JAJDGF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.