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Cluster: HRGMv2_4051_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4051_35 HRGMv2_4051_35_2 337 1212 - 3.A.1.1.38
STP HRGMv2_4051_35 HRGMv2_4051_35_3 1500 2834 - SBP_bac_1
TF HRGMv2_4051_35 HRGMv2_4051_35_4 3152 4423 + 0043669
TC HRGMv2_4051_35 HRGMv2_4051_35_5 4505 6379 - 3.A.3.6.16
pfam HRGMv2_4051_35 HRGMv2_4051_35_6 6485 6760 - Trns_repr_metal
CAZyme HRGMv2_4051_35 HRGMv2_4051_35_7 6909 7850 - GH159
pfam HRGMv2_4051_35 HRGMv2_4051_35_8 7899 8816 - IU_nuc_hydro
TF HRGMv2_4051_35 HRGMv2_4051_35_9 8806 10248 - HTH_AraC
TC HRGMv2_4051_35 HRGMv2_4051_35_10 10245 12044 - 8.A.59.2.1
STP HRGMv2_4051_35 HRGMv2_4051_35_11 12395 13624 + SBP_bac_1
TC HRGMv2_4051_35 HRGMv2_4051_35_12 13819 14703 + 3.A.1.1.42
TC HRGMv2_4051_35 HRGMv2_4051_35_13 14703 15530 + 3.A.1.1.39
CAZyme HRGMv2_4051_35 HRGMv2_4051_35_14 15541 17022 + GH51_1
STP HRGMv2_4051_35 HRGMv2_4051_35_15 17107 17778 - SIS
STP HRGMv2_4051_35 HRGMv2_4051_35_16 17829 18776 - Glucokinase
CAZyme HRGMv2_4051_35 HRGMv2_4051_35_17 19034 21688 - GH106
CAZyme HRGMv2_4051_35 HRGMv2_4051_35_18 21702 22946 - GH29
Gene ID: HRGMv2_4051_35_2
Type: TC
Location: 337 - 1212 (-)
Gene ID: HRGMv2_4051_35_3
Type: STP
Location: 1500 - 2834 (-)
Gene ID: HRGMv2_4051_35_4
Type: TF
Location: 3152 - 4423 (+)
Gene ID: HRGMv2_4051_35_5
Type: TC
Location: 4505 - 6379 (-)
Gene ID: HRGMv2_4051_35_6
Type: pfam
Location: 6485 - 6760 (-)
Gene ID: HRGMv2_4051_35_7
Type: CAZyme
Location: 6909 - 7850 (-)
Gene ID: HRGMv2_4051_35_8
Type: pfam
Location: 7899 - 8816 (-)
Gene ID: HRGMv2_4051_35_9
Type: TF
Location: 8806 - 10248 (-)
Gene ID: HRGMv2_4051_35_10
Type: TC
Location: 10245 - 12044 (-)
Gene ID: HRGMv2_4051_35_11
Type: STP
Location: 12395 - 13624 (+)
Gene ID: HRGMv2_4051_35_12
Type: TC
Location: 13819 - 14703 (+)
Gene ID: HRGMv2_4051_35_13
Type: TC
Location: 14703 - 15530 (+)
Gene ID: HRGMv2_4051_35_14
Type: CAZyme
Location: 15541 - 17022 (+)
Gene ID: HRGMv2_4051_35_15
Type: STP
Location: 17107 - 17778 (-)
Gene ID: HRGMv2_4051_35_16
Type: STP
Location: 17829 - 18776 (-)
Gene ID: HRGMv2_4051_35_17
Type: CAZyme
Location: 19034 - 21688 (-)
Gene ID: HRGMv2_4051_35_18
Type: CAZyme
Location: 21702 - 22946 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Aristaeellaceae
→
Genus
JAJDGF01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4051_35_6 vegetarian > vegan 1.29096 0.02254

🧭 Explore Read Mapping of CGC

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