Cluster: HRGMv2_4051_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4051
- CGC Family ID: CGCFAM_07128
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4051_32 | HRGMv2_4051_32_10 | 11092 | 12636 | + | 3.A.1.1.10 |
| TC | HRGMv2_4051_32 | HRGMv2_4051_32_11 | 12740 | 13669 | + | 3.A.1.1.10 |
| TC | HRGMv2_4051_32 | HRGMv2_4051_32_12 | 13683 | 14567 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_4051_32 | HRGMv2_4051_32_13 | 14628 | 17132 | + | GH2 |
| pfam | HRGMv2_4051_32 | HRGMv2_4051_32_14 | 17210 | 18295 | - | URO-D |
| CAZyme | HRGMv2_4051_32 | HRGMv2_4051_32_15 | 18350 | 19672 | - | GH29 |
| TC | HRGMv2_4051_32 | HRGMv2_4051_32_16 | 19834 | 20445 | - | 3.A.1.1.34 |
Gene ID: HRGMv2_4051_32_10
Type: TC
Location: 11092 - 12636 (+)
Type: TC
Location: 11092 - 12636 (+)
Gene ID: HRGMv2_4051_32_11
Type: TC
Location: 12740 - 13669 (+)
Type: TC
Location: 12740 - 13669 (+)
Gene ID: HRGMv2_4051_32_12
Type: TC
Location: 13683 - 14567 (+)
Type: TC
Location: 13683 - 14567 (+)
Gene ID: HRGMv2_4051_32_13
Type: CAZyme
Location: 14628 - 17132 (+)
Type: CAZyme
Location: 14628 - 17132 (+)
Gene ID: HRGMv2_4051_32_14
Type: pfam
Location: 17210 - 18295 (-)
Type: pfam
Location: 17210 - 18295 (-)
Gene ID: HRGMv2_4051_32_15
Type: CAZyme
Location: 18350 - 19672 (-)
Type: CAZyme
Location: 18350 - 19672 (-)
Gene ID: HRGMv2_4051_32_16
Type: TC
Location: 19834 - 20445 (-)
Type: TC
Location: 19834 - 20445 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
JAJDGF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.