Cluster: HRGMv2_4051_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4051
- CGC Family ID: CGCFAM_03488
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4051_23 | HRGMv2_4051_23_18 | 16005 | 18284 | - | GH2 |
| TC | HRGMv2_4051_23 | HRGMv2_4051_23_19 | 18304 | 19134 | - | 3.A.1.1.20 |
| TC | HRGMv2_4051_23 | HRGMv2_4051_23_20 | 19150 | 20085 | - | 3.A.1.1.28 |
| STP | HRGMv2_4051_23 | HRGMv2_4051_23_21 | 20251 | 21606 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4051_23 | HRGMv2_4051_23_22 | 22062 | 23978 | + | GH5_19 |
| CAZyme | HRGMv2_4051_23 | HRGMv2_4051_23_23 | 24068 | 26398 | + | GH2 |
| TC | HRGMv2_4051_23 | HRGMv2_4051_23_24 | 26462 | 27826 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_4051_23_18
Type: CAZyme
Location: 16005 - 18284 (-)
Type: CAZyme
Location: 16005 - 18284 (-)
Gene ID: HRGMv2_4051_23_19
Type: TC
Location: 18304 - 19134 (-)
Type: TC
Location: 18304 - 19134 (-)
Gene ID: HRGMv2_4051_23_20
Type: TC
Location: 19150 - 20085 (-)
Type: TC
Location: 19150 - 20085 (-)
Gene ID: HRGMv2_4051_23_21
Type: STP
Location: 20251 - 21606 (-)
Type: STP
Location: 20251 - 21606 (-)
Gene ID: HRGMv2_4051_23_22
Type: CAZyme
Location: 22062 - 23978 (+)
Type: CAZyme
Location: 22062 - 23978 (+)
Gene ID: HRGMv2_4051_23_23
Type: CAZyme
Location: 24068 - 26398 (+)
Type: CAZyme
Location: 24068 - 26398 (+)
Gene ID: HRGMv2_4051_23_24
Type: TC
Location: 26462 - 27826 (-)
Type: TC
Location: 26462 - 27826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
JAJDGF01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.