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Cluster: HRGMv2_4051_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4051_15 HRGMv2_4051_15_15 15652 16410 - 9.B.198.1.4
CAZyme HRGMv2_4051_15 HRGMv2_4051_15_16 16608 17549 + CE4
TC HRGMv2_4051_15 HRGMv2_4051_15_17 17885 19696 + 3.A.1.135.5
TC HRGMv2_4051_15 HRGMv2_4051_15_18 19744 21573 + 3.A.1.106.3
TC HRGMv2_4051_15 HRGMv2_4051_15_19 21697 23040 + 2.A.66.1.33
pfam HRGMv2_4051_15 HRGMv2_4051_15_20 23048 24772 - SNF2-rel_dom | Helicase_C
NULL(UNKNOWN) HRGMv2_4051_15 HRGMv2_4051_15_21 24769 25149 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4051_15 HRGMv2_4051_15_22 25196 27754 - 3.A.3.5.15
Gene ID: HRGMv2_4051_15_15
Type: TC
Location: 15652 - 16410 (-)
Gene ID: HRGMv2_4051_15_16
Type: CAZyme
Location: 16608 - 17549 (+)
Gene ID: HRGMv2_4051_15_17
Type: TC
Location: 17885 - 19696 (+)
Gene ID: HRGMv2_4051_15_18
Type: TC
Location: 19744 - 21573 (+)
Gene ID: HRGMv2_4051_15_19
Type: TC
Location: 21697 - 23040 (+)
Gene ID: HRGMv2_4051_15_20
Type: pfam
Location: 23048 - 24772 (-)
Gene ID: HRGMv2_4051_15_21
Type:
Location: 24769 - 25149 (-)
Gene ID: HRGMv2_4051_15_22
Type: TC
Location: 25196 - 27754 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Aristaeellaceae
→
Genus
JAJDGF01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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